prof. Ing. Daniel Schwarz, Ph.D.

Curriculum vitae

Name, first names, scientific degrees

• Daniel Schwarz, PhD
• born 20th June 1977

Department/Faculty/University

• Institute of Biostatistics and Analyses, Faculty of Medicine, Masaryk University

Function, current position

• Associate Professor

Education and academic qualifications

• 2015: Assoc. Prof. in Biomedical engineering - Brno University of Technology
• 2005: Ph.D. degree in Biomedical electronics and biocybernetics - Brno University of Technology
• 2000: Ing. (eq. MSc.) degree in Electronics and communication technologies - Brno University of Technology

Professional experience

• 2005-now: Masaryk University
• 2002-2004: SOVA NET, s.r.o.

Teaching activities

• Teaching at Masaryk University, Faculty of Science - Mathematical Biology, Modeling and Calculations: Linear and Adaptive Data Processing, Project of Mathematical Biology.
• Teaching at Brno University of Technology - Biomedical and Ecological Engineering, Biomedical Engineering and Bioinformatics.
• Leadership of doctoral students in the field of Neuroscience at the Faculty of Medicine, Masaryk University
• Head of Neurominer.cz working group focused on the scientific work of students with multidimensional neuroimaging data

Research activities

• Medical image processing and analysis, computational neuroanatomy, neuroimaging, machine learning.
• Medical informatics, technology-enhanced learning in medical education, virtual patients.

Professional stays abroad

• 4/2012: Structural neuroimaging laboratory, Dep. of Psychiatry, University Medical Center, Utrecht, Netherlands: 7 T MRI data preprocessing for diffusion tractography

Other academic activities, research projects, grants

• since 2014: member of the committee for simulations at the Faculty of Medicine, Masaryk University
• since 2007: member of the Editorial board at the Faculty of Medicine, Masaryk University

Non-university activities

• 2017-now: member of the board of Biomedical Engineering and Bioinformatics study programme at Brno University of Technology
• 2013-now: member of the Czech Society for Clinical Neurophysiology ČLS JEP, HuBraM – section for functional mapping of brain
• 2013-now: editor-in-chief of the MEFANET Journal
• 2012-now: external cooperation with the Behavioral and Social Neuroscience research group at the Central European Institute of Technology CEITEC

Most significant professional accomplishments

• 2014-now: president of the coordinating committee of the educational network of Czech and Slovak medical faculties – MEFANET 2007-now: chairman of the MEFANET annual conferences

Major publications

• DLUHOŠ, Petr; Daniel SCHWARZ; Wiepke CAHN; Neeltje van HAREN; René KAHN; Filip ŠPANIEL; Jiří HORÁČEK; Tomáš KAŠPÁREK a Hugo SCHNACK. Multi-center machine learning in imaging psychiatry: A meta-model approach. NeuroImage. San Diego: Academic Press Inc Elsevier Science, 2017, roč. 155, 15 July 2017, s. 10-24. ISSN 1053-8119. Dostupné z: https://dx.doi.org/10.1016/j.neuroimage.2017.03.027. info
• JANOUŠOVÁ, Eva; Giovanni MONTANA; Tomáš KAŠPÁREK a Daniel SCHWARZ. Supervised, Multivariate, Whole-Brain Reduction Did Not Help to Achieve High Classification Performance in Schizophrenia Research. Frontiers in Neuroscience. Lausanne: Frontiers Media S.A., 2016, roč. 10, AUG, s. 1-15. ISSN 1662-453X. Dostupné z: https://dx.doi.org/10.3389/fnins.2016.00392. info
• POPOVICI, Vlad; Eva BUDINSKÁ; Lenka ČÁPKOVÁ; Daniel SCHWARZ; Ladislav DUŠEK; Josef FEIT a Rolf JAGGI. Joint analysis of histopathology image features and gene expression in breast cancer. BMC Bioinformatics. London: BioMed Central, 2016, roč. 17, č. 209, s. 1-9. ISSN 1471-2105. Dostupné z: https://dx.doi.org/10.1186/s12859-016-1072-z. info
• KOMENDA, Martin; Daniel SCHWARZ; Jan ŠVANCARA; Christos VAITSIS; Nabil ZARY a Ladislav DUŠEK. Practical use of medical terminology in curriculum mapping. Computers in Biology and Medicine. Oxford: Pergamon-Elsevier Science Press, 2015, roč. 63, August 01, s. 74-82. ISSN 0010-4825. Dostupné z: https://dx.doi.org/10.1016/j.compbiomed.2015.05.006. info
• JANOUŠOVÁ, Eva; Daniel SCHWARZ a Tomáš KAŠPÁREK. Combining various types of classifiers and features extracted from magnetic resonance imaging data in schizophrenia recognition. Psychiatry Research: Neuroimaging. CLARE: ELSEVIER IRELAND LTD, 2015, roč. 232, č. 3, s. 237-249. ISSN 0925-4927. Dostupné z: https://dx.doi.org/10.1016/j.pscychresns.2015.03.004. info
• KOMENDA, Martin; Martin VÍTA; Christos VAITSIS; Daniel SCHWARZ; Andrea POKORNÁ; Nabil ZARY a Ladislav DUŠEK. Curriculum Mapping with Academic Analytics in Medical and Healthcare Education. Plos One. San Francisco: Public Library Science, 2015, roč. 10, č. 12, s. 1-18. ISSN 1932-6203. Dostupné z: https://dx.doi.org/10.1371/journal.pone.0143748. info
• SCHWARZ, Daniel a Tomáš KAŠPÁREK. Brain morphometry of MR images for automated classification of first-episode schizophrenia. Information Fusion. ELSEVIER SCIENCE BV, 2014, roč. 19, č. 1, s. 97-102. ISSN 1566-2535. Dostupné z: https://dx.doi.org/10.1016/j.inffus.2013.02.002. info
• DLUHOŠ, Petr; Daniel SCHWARZ a Tomáš KAŠPÁREK. Wavelet Features for Recognition of First Episode of Schizophrenia from MRI Brain Images. Radioengineering. SPOLECNOST PRO RADIOELEKTRONICKE INZENYRSTVI, 2014, roč. 23, č. 1, s. 274-281. ISSN 1210-2512. URL info
• SCHWARZ, Daniel; Ladislav DUŠEK; Martin BAREŠ; Julie BIENERTOVÁ VAŠKŮ; Jitka FEBEROVÁ; Jiří KOFRÁNEK; Martin KOMENDA; Barbora LUDÍKOVÁ; Jiří MAYER; Jaroslav MAJERNÍK; Radim POLČÁK; Jarmila POTOMKOVÁ; Michal PROCHÁZKA; Adrian RAUDASCHL; Petr ŠTOURAČ; Jaroslav ŠTĚRBA; Stanislav ŠTÍPEK; Čestmír ŠTUKA; Ilja TACHECÍ a Martin VEJRAŽKA. Computer applications systems and networks for medical education : MEFANET: Czech and Slovak Medical Faculties Network. 1st ed. Brno: Masaryk University, Institute of Biostatistics and Analyses : Facta Medica, 2014, 230 s. ISBN 978-80-904731-9-5. Dostupné z: https://dx.doi.org/10.13140/2.1.1383.0723. URL info
• SCHWARZ, Daniel; Petr ŠTOURAČ; Martin KOMENDA; Hana HARAZIM; Martina KOSINOVÁ; Jakub GREGOR; Richard HŮLEK; Olga SMÉKALOVÁ; Ivo KŘIKAVA; Roman ŠTOUDEK a Ladislav DUŠEK. Interactive algorithms for teaching and learning acute medicine in the network of medical faculties MEFANET. Journal of medical Internet research. Toronto: JMIR Publications Inc., 2013, roč. 15, č. 7, s. 298-311. ISSN 1438-8871. Dostupné z: https://dx.doi.org/10.2196/jmir.2590. info
• SCHWARZ, Daniel; Milan ADAMUS; Vladimír ČERNÝ; Ladislav DUŠEK; Jan MALÁSKA; Martin MATĚJOVIČ; Pavel ŠEVČÍK; Vladimír ŠRÁMEK a Martin SLEZÁK. EPOSS & SEPSIS-Q: návrh a popis řešení projektů pro sledování léčby, morbidity a mortality pacientů s těžkou sepsí v České republice. Anesteziologie & intenzivní medicína. Praha: Česká lékařská společnost J.E. Purkyně, 2013, roč. 24, č. 4, s. 240-249. ISSN 1214-2158. info
• SCHWARZ, Daniel; Tomáš KAŠPÁREK a Eva JANOUŠOVÁ. Rozpoznávání pacientů s první epizodou schizofrenie s využitím obrazů mozku z MRI. Clinician and Technology (Lékař a technika). Praha: Czech Medical Association J.E.Purkyne, 2011, roč. 41, č. 1, s. 27-34. ISSN 0301-5491. info
• SCHWARZ, Daniel; Tomáš KAŠPÁREK; Ivo PROVAZNÍK a Jiří JARKOVSKÝ. A Deformable Registration Method for Automated Morphometry of MRI Brain Images in Neuropsychiatric Research. IEEE Transactions on Medical Imaging. New York: IEEE, 2007, roč. 26, č. 4, s. 452-461. ISSN 0278-0062. URL info
• KAŠPÁREK, Tomáš; Radovan PŘIKRYL; Daniel SCHWARZ; Hana KUČEROVÁ; Michal MIKL; Eva ČEŠKOVÁ a Petr KRUPA. Reduction of prefrontal gray matter volume in first-episode schizophrenia independent of risperidon treatment. The International Journal of Neuropsychopharmacology. Cambridge, U.K.: Cambridge University Press, 2006, suppl. 1, č. 9, s. 224. ISSN 1461-1457. info
• SCHWARZ, Daniel a Ivo PROVAZNÍK. Low-dimensional Multimodal Deformable Registration of MRI Brain Images in Stereotaxic Space. European Journal for Biomedical Informatics. 2006, roč. 2006, č. 1, s. 90-97. ISSN 1801-5603. URL info
• SCHWARZ, Daniel a Ivo PROVAZNÍK. Statistically Based Segmentation of Medical Images and Their Visualisation. In VI International Conference PROCEEDINGS Symbiosis 2001. Gliwice: Silesian University of Technology, 2001, s. 10-14. ISBN 80-214-0893-6. info

2017/08/22