Project information
CERIT Scientific Cloud
(CERIT-SC)
- Project Identification
- LM2015085
- Project Period
- 1/2016 - 12/2019
- Investor / Pogramme / Project type
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Ministry of Education, Youth and Sports of the CR
- Large Infrastructures for Research, Development and Innovation
- MU Faculty or unit
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Institute of Computer Science
- prof. RNDr. Luděk Matyska, CSc.
- RNDr. David Antoš, Ph.D.
- doc. RNDr. Jiří Filipovič, Ph.D.
- RNDr. Lukáš Hejtmánek, Ph.D.
- Mgr. Vlastimil Holer
- Mgr. Martin Horáček
- Ing. Radek Hrabovský
- Mgr. Kristián Katanik
- RNDr. Daniel Kouřil, Ph.D.
- Mgr. Iva Krejčí
- Roman Kružík
- Mgr. Ivana Křenková
- RNDr. Martin Kuba, Ph.D.
- Mgr. Marek Pastierik
- Mgr. Filip Petrovič
- Mgr. Jan Plhák
- Mgr. Zdeněk Salvet
- Mgr. Vojtěch Sassmann
- RNDr. Viktória Spišaková
- Mgr. Ing. Tomáš Svoboda
- Mgr. Karolína Trachtová
- Project Website
- https://www.cerit-sc.cz/en
- Keywords
- cloud computing and storage; compute and storage middleware; e-infrastructure
The research infrastructure CERIT-SC (CERIT Scientific Cloud) is a unique experimental environment combining computational and storage capacities with excellent expertise required for their efficient usage in various scientific areas. Hence a highly adaptive environment capable of fast reactions to evolving needs is available to the scientific community of the Czech Republic as well as its international partners.
At the experimental platform of CERIT-SC, new approaches and designs of e-infrastructure architectures and operation are developed and evaluated in collaboration with user groups. CERIT-SC also operates part of e-infrastructure of large projects (ESFRI in particular), focusing on areas where current production systems are not sufficient. Scientific collaboration with the users by direct involvement in national and international projects is a unique feature of CERIT-SC - its employees bring the necessary ICT expertise into interdisciplinary research, increasing quality of research and its outputs. Research activities of CERIT-SC on its own are also related to these collaborations, they focus on development and efficient use of e-infrastructures. CERIT-SC is the largest and the most important node of the national computational grid, and with the utilized technologies and approaches it is also the most important national partner of the emerging European Open Science Cloud initiative.
The main goal of CERIT-SC is development of the flexible experimental platform, as well as development of associated knowledge and expertise, in particular through direct research collaboration with its users. Thus CERIT-SC is a natural synergic partner of CESNET and IT4Innovations, the other partners of the complex national e-infrastructure.
Publications
Total number of publications: 214
2019
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CaverDock: a molecular docking-based tool to analyse ligand transport through protein tunnels and channels
Bioinformatics, year: 2019, volume: 35, edition: 23, DOI
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Comment on “Database for CO2 Separation Performances of MOFs Based on Computational Materials Screening”
ACS Applied Materials & Interfaces, year: 2019, volume: 11, edition: 18, DOI
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Composite lymphoma of concurrent T zone lymphoma and large cell B cell lymphoma in a dog
BMC Veterinary Research, year: 2019, volume: 15, edition: 1, DOI
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Computational Modelling of Metabolic Burden and Substrate Toxicity in Escherichia coli Carrying a Synthetic Metabolic Pathway
Microorganisms, year: 2019, volume: 7, edition: 11, DOI
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Computational Study of Protein-Ligand Unbinding for Enzyme Engineering
FRONTIERS IN CHEMISTRY, year: 2019, volume: 6, edition: JAN 2019, DOI
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Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium Marinobacter sp. ELB17
Microorganisms, year: 2019, volume: 7, edition: 11, DOI
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Directly Sequenced Genomes of Contemporary Strains of Syphilis Reveal Recombination-Driven Diversity in Genes Encoding Predicted Surface-Exposed Antigens
Frontiers in Microbiology, year: 2019, volume: 10, edition: JUL 31 2019, DOI
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Dishevelled-3 conformation dynamics analyzed by FRET-based biosensors reveals a key role of casein kinase 1
Nature Communications, year: 2019, volume: 10, edition: APR 18 2019, DOI
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Effect of high pressure on magnetic properties of CrMnFeCoNi high entropy alloy
Journal of Magnetism and Magnetic Materials, year: 2019, volume: 487, edition: OCT 1 2019, DOI
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Engineering enzyme access tunnels
BIOTECHNOLOGY ADVANCES, year: 2019, volume: 37, edition: 6, DOI